R Workflows

Reproducible analysis notebooks

Each workflow should explain its inputs, assumptions, software dependencies, outputs, and quality checks. Do not add participant-level or otherwise sensitive data to this public repository.

Recommended workflow

1. Create a branch for the analysis.
2. Add or revise a .qmd notebook in this folder.
3. Keep reusable functions in R/ and tests in tests/.
4. Render locally with quarto render.
5. Open a pull request for scientific and code review.

TipReproducible environments

Once the analysis packages are selected, initialize renv and commit renv.lock. This records exact R package versions without committing the package library itself.